HBV/HIV co-infection and APOBEC3G polymorphisms in a population from Burkina Faso.
Identifieur interne : 000194 ( Main/Exploration ); précédent : 000193; suivant : 000195HBV/HIV co-infection and APOBEC3G polymorphisms in a population from Burkina Faso.
Auteurs : Tegwinde Rebeca Compaore [Burkina Faso] ; Birama Diarra [Burkina Faso] ; Maleki Assih [Burkina Faso] ; Dorcas Obiri-Yeboah [Ghana] ; Serge Theophile Soubeiga [Burkina Faso] ; Abdoul Karim Ouattara [Burkina Faso] ; Damehan Tchelougou [Burkina Faso] ; Cyrille Bisseye [Burkina Faso] ; Didier Romuald Bakouan [Burkina Faso] ; Issaka Pierre Compaore [Burkina Faso] ; Augustine Dembele [Burkina Faso] ; Wendkuuni Florencia Djigma [Burkina Faso] ; Jacques Simpore [Burkina Faso]Source :
- BMC infectious diseases [ 1471-2334 ] ; 2016.
Descripteurs français
- KwdFr :
- APOBEC-3G Deaminase (génétique), Adulte, Allèles, Burkina (épidémiologie), Co-infection (génétique), Co-infection (épidémiologie), Femelle, Fréquence d'allèle, Génotype, Haplotypes, Humains, Hépatite B (génétique), Hépatite B (épidémiologie), Infections à VIH (génétique), Infections à VIH (épidémiologie), Mâle, Polymorphisme de nucléotide simple, Prédisposition génétique à une maladie, Prévalence, VIH-1 (Virus de l'Immunodéficience Humaine de type 1) (pathogénicité), Virus de l'hépatite B (pathogénicité), Études cas-témoins, Études d'associations génétiques.
- MESH :
- génétique : APOBEC-3G Deaminase, Co-infection, Hépatite B, Infections à VIH.
- pathogénicité : VIH-1 (Virus de l'Immunodéficience Humaine de type 1), Virus de l'hépatite B.
- épidémiologie : Burkina, Co-infection, Hépatite B, Infections à VIH.
- Adulte, Allèles, Femelle, Fréquence d'allèle, Génotype, Haplotypes, Humains, Mâle, Polymorphisme de nucléotide simple, Prédisposition génétique à une maladie, Prévalence, Études cas-témoins, Études d'associations génétiques.
English descriptors
- KwdEn :
- APOBEC-3G Deaminase (genetics), Adult, Alleles, Burkina Faso (epidemiology), Case-Control Studies, Coinfection (epidemiology), Coinfection (genetics), Female, Gene Frequency, Genetic Association Studies, Genetic Predisposition to Disease, Genotype, HIV Infections (epidemiology), HIV Infections (genetics), HIV-1 (pathogenicity), Haplotypes, Hepatitis B (epidemiology), Hepatitis B (genetics), Hepatitis B virus (pathogenicity), Humans, Male, Polymorphism, Single Nucleotide, Prevalence.
- MESH :
- chemical , genetics : APOBEC-3G Deaminase.
- epidemiology : Burkina Faso, Coinfection, HIV Infections, Hepatitis B.
- genetics : Coinfection, HIV Infections, Hepatitis B.
- pathogenicity : HIV-1, Hepatitis B virus.
- Adult, Alleles, Case-Control Studies, Female, Gene Frequency, Genetic Association Studies, Genetic Predisposition to Disease, Genotype, Haplotypes, Humans, Male, Polymorphism, Single Nucleotide, Prevalence.
Abstract
Apolipoprotein B mRNA editing enzyme catalytic polypeptide-like 3G (APOBEC3G) is a potent host defense factor, which interferes with HIV-1 and HBV. Our study had three objectives, to screen a population of HIV-1 infected and uninfected patients in Burkina Faso for HBV, to screen the population for APOBEC3G variants rs6001417, rs8177832, and rs35228531 previously described, and to analyze the effect of these three variants and their haplotypes on HIV-1/HBV co-infection in Burkina Faso.
DOI: 10.1186/s12879-016-1672-2
PubMed: 27449138
Affiliations:
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sortKey="Compaore, Tegwinde Rebeca" sort="Compaore, Tegwinde Rebeca" uniqKey="Compaore T" first="Tegwinde Rebeca" last="Compaore">Tegwinde Rebeca Compaore</name><affiliation wicri:level="1"><nlm:affiliation>Pietro Annigoni Biomolecular Research Centre (CERBA)/LABIOGENE, University of Ouagadougou, Ouagadougou, Burkina Faso.</nlm:affiliation><country xml:lang="fr">Burkina Faso</country><wicri:regionArea>Pietro Annigoni Biomolecular Research Centre (CERBA)/LABIOGENE, University of Ouagadougou, Ouagadougou</wicri:regionArea><wicri:noRegion>Ouagadougou</wicri:noRegion></affiliation></author><author><name sortKey="Diarra, Birama" sort="Diarra, Birama" uniqKey="Diarra B" first="Birama" last="Diarra">Birama Diarra</name><affiliation wicri:level="1"><nlm:affiliation>Pietro Annigoni Biomolecular Research Centre (CERBA)/LABIOGENE, University of Ouagadougou, Ouagadougou, Burkina Faso.</nlm:affiliation><country xml:lang="fr">Burkina Faso</country><wicri:regionArea>Pietro Annigoni Biomolecular Research Centre (CERBA)/LABIOGENE, University of Ouagadougou, Ouagadougou</wicri:regionArea><wicri:noRegion>Ouagadougou</wicri:noRegion></affiliation></author><author><name sortKey="Assih, Maleki" sort="Assih, Maleki" uniqKey="Assih M" first="Maleki" last="Assih">Maleki Assih</name><affiliation wicri:level="1"><nlm:affiliation>Pietro Annigoni Biomolecular Research Centre (CERBA)/LABIOGENE, University of Ouagadougou, Ouagadougou, Burkina Faso.</nlm:affiliation><country xml:lang="fr">Burkina Faso</country><wicri:regionArea>Pietro Annigoni Biomolecular Research Centre (CERBA)/LABIOGENE, University of Ouagadougou, Ouagadougou</wicri:regionArea><wicri:noRegion>Ouagadougou</wicri:noRegion></affiliation></author><author><name sortKey="Obiri Yeboah, Dorcas" sort="Obiri Yeboah, Dorcas" uniqKey="Obiri Yeboah D" first="Dorcas" last="Obiri-Yeboah">Dorcas Obiri-Yeboah</name><affiliation wicri:level="1"><nlm:affiliation>Department of Microbiology and Immunology, School of Medical Sciences, University of Cape Coast, Cape Coast, Ghana.</nlm:affiliation><country xml:lang="fr">Ghana</country><wicri:regionArea>Department of Microbiology and Immunology, School of Medical Sciences, University of Cape Coast, Cape Coast</wicri:regionArea><wicri:noRegion>Cape Coast</wicri:noRegion></affiliation></author><author><name sortKey="Soubeiga, Serge Theophile" sort="Soubeiga, Serge Theophile" uniqKey="Soubeiga S" first="Serge Theophile" last="Soubeiga">Serge Theophile Soubeiga</name><affiliation wicri:level="1"><nlm:affiliation>Pietro Annigoni Biomolecular Research Centre (CERBA)/LABIOGENE, University of Ouagadougou, Ouagadougou, Burkina Faso.</nlm:affiliation><country xml:lang="fr">Burkina Faso</country><wicri:regionArea>Pietro Annigoni Biomolecular Research Centre (CERBA)/LABIOGENE, University of Ouagadougou, Ouagadougou</wicri:regionArea><wicri:noRegion>Ouagadougou</wicri:noRegion></affiliation></author><author><name sortKey="Ouattara, Abdoul Karim" sort="Ouattara, Abdoul Karim" uniqKey="Ouattara A" first="Abdoul Karim" last="Ouattara">Abdoul Karim Ouattara</name><affiliation wicri:level="1"><nlm:affiliation>Pietro Annigoni Biomolecular Research Centre (CERBA)/LABIOGENE, University of Ouagadougou, Ouagadougou, Burkina Faso.</nlm:affiliation><country xml:lang="fr">Burkina Faso</country><wicri:regionArea>Pietro Annigoni Biomolecular Research Centre (CERBA)/LABIOGENE, University of Ouagadougou, Ouagadougou</wicri:regionArea><wicri:noRegion>Ouagadougou</wicri:noRegion></affiliation></author><author><name sortKey="Tchelougou, Damehan" sort="Tchelougou, Damehan" uniqKey="Tchelougou D" first="Damehan" last="Tchelougou">Damehan Tchelougou</name><affiliation wicri:level="1"><nlm:affiliation>Pietro Annigoni Biomolecular Research Centre (CERBA)/LABIOGENE, University of Ouagadougou, Ouagadougou, Burkina Faso.</nlm:affiliation><country xml:lang="fr">Burkina Faso</country><wicri:regionArea>Pietro Annigoni Biomolecular Research Centre (CERBA)/LABIOGENE, University of Ouagadougou, Ouagadougou</wicri:regionArea><wicri:noRegion>Ouagadougou</wicri:noRegion></affiliation></author><author><name sortKey="Bisseye, Cyrille" sort="Bisseye, Cyrille" uniqKey="Bisseye C" first="Cyrille" last="Bisseye">Cyrille Bisseye</name><affiliation wicri:level="1"><nlm:affiliation>Pietro Annigoni Biomolecular Research Centre (CERBA)/LABIOGENE, University of Ouagadougou, Ouagadougou, Burkina Faso.</nlm:affiliation><country xml:lang="fr">Burkina Faso</country><wicri:regionArea>Pietro Annigoni Biomolecular Research Centre (CERBA)/LABIOGENE, University of Ouagadougou, Ouagadougou</wicri:regionArea><wicri:noRegion>Ouagadougou</wicri:noRegion></affiliation></author><author><name sortKey="Bakouan, Didier Romuald" sort="Bakouan, Didier Romuald" uniqKey="Bakouan D" first="Didier Romuald" last="Bakouan">Didier Romuald Bakouan</name><affiliation wicri:level="1"><nlm:affiliation>Permanent Secretary against Aids and sexually transmitted diseases, Ouagadougou, Burkina Faso.</nlm:affiliation><country xml:lang="fr">Burkina Faso</country><wicri:regionArea>Permanent Secretary against Aids and sexually transmitted diseases, Ouagadougou</wicri:regionArea><wicri:noRegion>Ouagadougou</wicri:noRegion></affiliation></author><author><name sortKey="Compaore, Issaka Pierre" sort="Compaore, Issaka Pierre" uniqKey="Compaore I" first="Issaka Pierre" last="Compaore">Issaka Pierre Compaore</name><affiliation wicri:level="1"><nlm:affiliation>Pietro Annigoni Biomolecular Research Centre (CERBA)/LABIOGENE, University of Ouagadougou, Ouagadougou, Burkina Faso.</nlm:affiliation><country xml:lang="fr">Burkina Faso</country><wicri:regionArea>Pietro Annigoni Biomolecular Research Centre (CERBA)/LABIOGENE, University of Ouagadougou, Ouagadougou</wicri:regionArea><wicri:noRegion>Ouagadougou</wicri:noRegion></affiliation></author><author><name sortKey="Dembele, Augustine" sort="Dembele, Augustine" uniqKey="Dembele A" first="Augustine" last="Dembele">Augustine Dembele</name><affiliation wicri:level="1"><nlm:affiliation>Permanent Secretary against Aids and sexually transmitted diseases, Ouagadougou, Burkina Faso.</nlm:affiliation><country xml:lang="fr">Burkina Faso</country><wicri:regionArea>Permanent Secretary against Aids and sexually transmitted diseases, Ouagadougou</wicri:regionArea><wicri:noRegion>Ouagadougou</wicri:noRegion></affiliation></author><author><name sortKey="Djigma, Wendkuuni Florencia" sort="Djigma, Wendkuuni Florencia" uniqKey="Djigma W" first="Wendkuuni Florencia" last="Djigma">Wendkuuni Florencia Djigma</name><affiliation wicri:level="1"><nlm:affiliation>Pietro Annigoni Biomolecular Research Centre (CERBA)/LABIOGENE, University of Ouagadougou, Ouagadougou, Burkina Faso.</nlm:affiliation><country xml:lang="fr">Burkina Faso</country><wicri:regionArea>Pietro Annigoni Biomolecular Research Centre (CERBA)/LABIOGENE, University of Ouagadougou, Ouagadougou</wicri:regionArea><wicri:noRegion>Ouagadougou</wicri:noRegion></affiliation></author><author><name sortKey="Simpore, Jacques" sort="Simpore, Jacques" uniqKey="Simpore J" first="Jacques" last="Simpore">Jacques Simpore</name><affiliation wicri:level="1"><nlm:affiliation>Pietro Annigoni Biomolecular Research Centre (CERBA)/LABIOGENE, University of Ouagadougou, Ouagadougou, Burkina Faso. jacques.simpore@yahoo.fr.</nlm:affiliation><country xml:lang="fr">Burkina Faso</country><wicri:regionArea>Pietro Annigoni Biomolecular Research Centre (CERBA)/LABIOGENE, University of Ouagadougou, Ouagadougou</wicri:regionArea><wicri:noRegion>Ouagadougou</wicri:noRegion></affiliation></author></analytic><series><title level="j">BMC infectious diseases</title><idno type="eISSN">1471-2334</idno><imprint><date when="2016" type="published">2016</date></imprint></series></biblStruct></sourceDesc></fileDesc><profileDesc><textClass><keywords scheme="KwdEn" xml:lang="en"><term>APOBEC-3G Deaminase 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d'allèle</term><term>Génotype</term><term>Haplotypes</term><term>Humains</term><term>Hépatite B (génétique)</term><term>Hépatite B (épidémiologie)</term><term>Infections à VIH (génétique)</term><term>Infections à VIH (épidémiologie)</term><term>Mâle</term><term>Polymorphisme de nucléotide simple</term><term>Prédisposition génétique à une maladie</term><term>Prévalence</term><term>VIH-1 (Virus de l'Immunodéficience Humaine de type 1) (pathogénicité)</term><term>Virus de l'hépatite B (pathogénicité)</term><term>Études cas-témoins</term><term>Études d'associations génétiques</term></keywords><keywords scheme="MESH" type="chemical" qualifier="genetics" xml:lang="en"><term>APOBEC-3G Deaminase</term></keywords><keywords scheme="MESH" qualifier="epidemiology" xml:lang="en"><term>Burkina Faso</term><term>Coinfection</term><term>HIV Infections</term><term>Hepatitis B</term></keywords><keywords scheme="MESH" qualifier="genetics" xml:lang="en"><term>Coinfection</term><term>HIV Infections</term><term>Hepatitis B</term></keywords><keywords scheme="MESH" qualifier="génétique" xml:lang="fr"><term>APOBEC-3G Deaminase</term><term>Co-infection</term><term>Hépatite B</term><term>Infections à VIH</term></keywords><keywords scheme="MESH" qualifier="pathogenicity" xml:lang="en"><term>HIV-1</term><term>Hepatitis B virus</term></keywords><keywords scheme="MESH" qualifier="pathogénicité" xml:lang="fr"><term>VIH-1 (Virus de l'Immunodéficience Humaine de type 1)</term><term>Virus de l'hépatite B</term></keywords><keywords scheme="MESH" qualifier="épidémiologie" xml:lang="fr"><term>Burkina</term><term>Co-infection</term><term>Hépatite B</term><term>Infections à VIH</term></keywords><keywords scheme="MESH" xml:lang="en"><term>Adult</term><term>Alleles</term><term>Case-Control Studies</term><term>Female</term><term>Gene Frequency</term><term>Genetic Association Studies</term><term>Genetic Predisposition to Disease</term><term>Genotype</term><term>Haplotypes</term><term>Humans</term><term>Male</term><term>Polymorphism, Single Nucleotide</term><term>Prevalence</term></keywords><keywords scheme="MESH" xml:lang="fr"><term>Adulte</term><term>Allèles</term><term>Femelle</term><term>Fréquence d'allèle</term><term>Génotype</term><term>Haplotypes</term><term>Humains</term><term>Mâle</term><term>Polymorphisme de nucléotide simple</term><term>Prédisposition génétique à une maladie</term><term>Prévalence</term><term>Études cas-témoins</term><term>Études d'associations génétiques</term></keywords></textClass></profileDesc></teiHeader><front><div type="abstract" xml:lang="en">Apolipoprotein B mRNA editing enzyme catalytic polypeptide-like 3G (APOBEC3G) is a potent host defense factor, which interferes with HIV-1 and HBV. Our study had three objectives, to screen a population of HIV-1 infected and uninfected patients in Burkina Faso for HBV, to screen the population for APOBEC3G variants rs6001417, rs8177832, and rs35228531 previously described, and to analyze the effect of these three variants and their haplotypes on HIV-1/HBV co-infection in Burkina Faso.</div></front></TEI><affiliations><list><country><li>Burkina Faso</li><li>Ghana</li></country></list><tree><country name="Burkina Faso"><noRegion><name sortKey="Compaore, Tegwinde Rebeca" sort="Compaore, Tegwinde Rebeca" uniqKey="Compaore T" first="Tegwinde Rebeca" last="Compaore">Tegwinde Rebeca Compaore</name></noRegion><name sortKey="Assih, Maleki" sort="Assih, Maleki" uniqKey="Assih M" first="Maleki" last="Assih">Maleki Assih</name><name sortKey="Bakouan, Didier Romuald" sort="Bakouan, Didier Romuald" uniqKey="Bakouan D" first="Didier Romuald" last="Bakouan">Didier Romuald Bakouan</name><name sortKey="Bisseye, Cyrille" sort="Bisseye, Cyrille" uniqKey="Bisseye C" first="Cyrille" last="Bisseye">Cyrille Bisseye</name><name sortKey="Compaore, Issaka Pierre" sort="Compaore, Issaka Pierre" uniqKey="Compaore I" first="Issaka Pierre" last="Compaore">Issaka Pierre Compaore</name><name sortKey="Dembele, Augustine" sort="Dembele, Augustine" uniqKey="Dembele A" first="Augustine" last="Dembele">Augustine Dembele</name><name sortKey="Diarra, Birama" sort="Diarra, Birama" uniqKey="Diarra B" first="Birama" last="Diarra">Birama Diarra</name><name sortKey="Djigma, Wendkuuni Florencia" sort="Djigma, Wendkuuni Florencia" uniqKey="Djigma W" first="Wendkuuni Florencia" last="Djigma">Wendkuuni Florencia Djigma</name><name sortKey="Ouattara, Abdoul Karim" sort="Ouattara, Abdoul Karim" uniqKey="Ouattara A" first="Abdoul Karim" last="Ouattara">Abdoul Karim Ouattara</name><name sortKey="Simpore, Jacques" sort="Simpore, Jacques" uniqKey="Simpore J" first="Jacques" last="Simpore">Jacques Simpore</name><name sortKey="Soubeiga, Serge Theophile" sort="Soubeiga, Serge Theophile" uniqKey="Soubeiga S" first="Serge Theophile" last="Soubeiga">Serge Theophile Soubeiga</name><name sortKey="Tchelougou, Damehan" sort="Tchelougou, Damehan" uniqKey="Tchelougou D" first="Damehan" last="Tchelougou">Damehan Tchelougou</name></country><country name="Ghana"><noRegion><name sortKey="Obiri Yeboah, Dorcas" sort="Obiri Yeboah, Dorcas" uniqKey="Obiri Yeboah D" first="Dorcas" last="Obiri-Yeboah">Dorcas Obiri-Yeboah</name></noRegion></country></tree></affiliations></record>Pour manipuler ce document sous Unix (Dilib)
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